PACMEN: PAn Cancer Mutation Expression Networks
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Select PPI:
UPPI
HIPPIE
Select comparison (Change = Mutation or CNV)
Mutation Expression
Mutation Protein
Change Expression
Change Protein
Select cancer dataset:
BLCA
BRCA
COAD
GBM
HNSC
KICH
KIRC
KIRP
LAML
LGG
LIHC
LUAD
LUSC
OV
PRAD
READ
SKCM
STAD
UCEC
Quantile threshold for mutated genes: (preloaded only)
Degree threshold for including highly connected proteins in UPPI: (preloaded only)
Significance threshold (FDR-controlled per mutated gene) for drawing edges:
Select database to highlight nodes:
none
CGC
DrugBank
NCG 4.0
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D3 Network Graph
Static Network Graph
Network topology